Back

Biological Cybernetics

Springer Science and Business Media LLC

Preprints posted in the last 90 days, ranked by how well they match Biological Cybernetics's content profile, based on 12 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.

1
Simplified model of intrinsically bursting neurons

Bhattasali, N.; Pinto, L.; Lindsay, G. W.

2026-03-05 neuroscience 10.64898/2026.03.03.709454 medRxiv
Top 0.1%
4.7%
Show abstract

Rhythmic neural activity underlies essential biological functions such as locomotion, breathing, and feeding. Computational models are widely used to study how such rhythms emerge from interactions between neuron-level and circuit-level dynamics. Intrinsically bursting neurons are key components of many central pattern generators (CPGs), yet existing models span a tradeoff between biological realism and practical usability. Biophysical models involve many parameters that are difficult to tune, whereas abstract models often integrate poorly into neural circuit simulations. We propose a simplified model of intrinsically bursting neurons derived from a reduced non-spiking biophysical formulation. The model integrates readily into neural circuits while enabling direct and independent control of bursting characteristics, including duration, amplitude, and shape. We show that the model reproduces single-unit biophysical responses to diverse stimuli as well as circuit-level activity patterns from crustacean and mammalian CPGs. This model provides a practical tool for studying rhythm generation in neural circuits.

2
Synchronization properties in C. elegans: Relating behavioral circuits to structural and functional neuronal connectivity

Sar, G. K.; Patton, A.; Towlson, E.; Davidsen, J.

2026-03-25 neuroscience 10.64898/2026.03.23.713580 medRxiv
Top 0.1%
4.2%
Show abstract

A central question in neuroscience is how neural processing generates or encodes behavior. Caenorhabditis elegans is well suited to addressing this question, given its compact nervous system and near-complete structural connectome. Despite this, findings from previous studies remain inconclusive. While some have shown that the connectome can robustly encode specific behaviors such as locomotion, others report that functional connectivity can be reconfigured across behaviors. We aim to understand the relationship between structural connectivity, functional connectivity and biological behavior in silico by using an experimentally motivated computational model leveraging the structural connectome. Stimulation of specific neurons in the model induces oscillatory neural responses, enabling us to infer neuronal functional connectivity. Functional connectivity is found to be stronger among some neurons, allowing us to identify functional communities. We find that electrical synapses play a critical role in determining functional communities, and the resulting mesoscale functional architecture is predominantly gap junctionally assortative. Furthermore, comparison with behavioral circuits shows that locomotion circuits are largely segregated into distinct functional communities while other circuits are more distributed across multiple functional communities. We also observe that stimulation of neurons belonging to these distributed circuits elicits a more synchronized neuronal response compared to stimulation of neurons within the more segregated circuits. This is consistent with the presence of behavioral patterns that originate in one circuit and terminate in another (e.g., chemosensation leading to locomotion), such that stimulation of one circuit can activate the other and eventually result in a synchronized response. We also find a large repertoire of chimera-like synchronization patterns upon stimulation of certain behavioral circuits (chemosensation, mechanosensation) indicating high dynamical flexibility. Overall, our results demonstrate that while certain behaviors are governed by functionally segregated circuits, others emerge from the synchronization of multiple functional communities, which are, to begin with, influenced by the underlying structural connectivity. Author summaryAnimals constantly transform sensory inputs into actions, but it is still unclear how this mapping from neural activity to behavior is implemented in a real nervous system. Caenorhabditis elegans offers a unique testbed for this question because its entire wiring diagram is nearly completely mapped. Yet, previous works have reached mixed conclusions about how well this anatomical circuit diagram predicts actual patterns of activity and behavior. Here, we use a biologically inspired computational model of the C. elegans nervous system to bridge this gap between structure, function, and behavior. By virtually stimulating individual neurons and observing the resulting network-wide oscillations, we infer how strongly different pairs and groups of neurons interact in functional terms. We then use network analysis tools to identify groups of neurons that tend to co-activate, and relate these functional communities to known behavioral circuits for locomotion and sensory processing. We find that gap junctions play a key role in shaping functional communities, and that locomotion-related neurons are more functionally segregated than neurons involved in other behaviors, which are more functionally distributed. Our results suggest that some behaviors rely on specialized, functionally isolated circuits, whereas others emerge from the coordinated activity of multiple functional communities.

3
An Analytical Description for Action Potential Thresholds Defined by Concavity Changes

Herrera-Valdez, M. A.

2026-04-24 neuroscience 10.64898/2026.04.21.719992 medRxiv
Top 0.1%
4.0%
Show abstract

A novel mathematical framework to define the threshold of action potentials in excitable cells is presented. Unlike previously applied methods that rely on approximations or specific fixed-point bifurcations, the approach focuses on the geometry of membrane potential trajectories. Specifically, the focus is on the concavity changes during the upstroke of an electrical pulse. These changes in concavity form a curve of inflection points that defines a region in phase space crossed by all the action potentials in the system, and containing no non-action potential trajectories. Such region is called the excitability region and its size can be measured, thus providing a measure for the excitability of a dynamical system, and a way to compare the excitability between systems representing different biological phenotypes and stimulus conditions. The work transforms the traditionally vague physiological concept of excitability into a rigorous analytical description applicable across continuous, single compartment models of electrical excitability.

4
Effects of muscle mass on muscle force predictions in human movement

Ing-Jeng, C.; Latreche, A.; A. Ross, S.; Almonacid, J.; JM Dick, T.; Vereecke, E.; Wakeling, J.

2026-04-02 physiology 10.64898/2026.03.30.714909 medRxiv
Top 0.1%
3.1%
Show abstract

Muscle mass significantly influences skeletal muscle behaviour, potentially explaining why traditional massless Hill-type models struggle to predict the forces generated by larger muscles during dynamic, submaximal contractions. However, the applicability of mass-enhanced Hill-type models in human locomotion remains unexplored. Here, we compared the predicted force from a 1D mass-enhanced Hill-type muscle model with a traditional 1D massless Hill-type muscle model across a range of experimentally measured human movements. Kinematic and electromyographic data were collected from twenty participants performing locomotor tasks and supplemented with existing cycling data. Muscle size was geometrically scaled by factors from 0.1 to 10, which causes lengths to be scaled proportionally, cross-sectional area and peak isometric force F0 with the square, and mass with the cube of the factor. Muscle tissue mass (inertia) and cadence increased the differences between mass-enhanced and massless predictions of force and power. At high cadence and the largest scale, the normalized root mean square difference between force traces reached 7% of F0, (averaged across muscles). However, differences between models were minimal (<1%) at human-sized scale 1. Real muscle additionally deforms in 3D, we still do not know the extent to which this extra dimensionality affects muscle forces for these human movements.

5
Postsynaptic integration of excitatory and inhibitory signals based on an adaptive firing threshold

Gambrell, O.; Singh, A.

2026-03-26 neuroscience 10.64898/2026.03.26.714497 medRxiv
Top 0.1%
2.4%
Show abstract

A key component of intraneuronal communication is the modulation of postsynaptic firing frequencies by stochastic transmitter release from presynaptic neurons. The time interval between successive postsynaptic firings is called the inter-spike interval (ISI), and understanding its statistics is integral to neural information processing. We start with a model of an excitatory chemical synapse with postsynaptic neuron firing governed as per a classical integrate-and-fire model. Using a first-passage time framework, we derive exact analytical results for the ISI statistical moments, revealing parameter regimes driving precision in postsynaptic action potential timing. Next, we extended this analysis to include both an excitatory and an inhibitory presynaptic connection onto the same postsynaptic neuron. We consider both a fixed postsynaptic-firing threshold and a threshold that adapts based on the postsynaptic membrane potential history. Our analysis shows that the latter adaptive threshold can result in scenarios where increasing the inhibitory input frequency increases the postsynaptic firing frequency. Moreover, we characterize parameter regimes where ISI noise is hypo-exponential or hyperexponential based on its coefficient of variation being less than or higher than one, respectively.

6
The muscle coordination required for efficient locomotion scales with body size

Latreche, A.; Ross, S. A.; Dick, T. J. M.; Konow, N.; Biewener, A. A.; Wakeling, J. M.

2026-05-03 bioengineering 10.64898/2026.04.30.722018 medRxiv
Top 0.1%
2.3%
Show abstract

AO_SCPLOWBSTRACTC_SCPLOWMuscle efficiency decreases with increasing size, largely due to a relative decrease in its mechanical output. Muscle mechanical output depends on its activation, strain, and strain rate and thus varies between different muscles within a limb during locomotion. Distinct muscle coordination patterns are required for efficient cycling, and so we would expect that the coordination patterns for efficient cycling or indeed locomotion would change across animal sizes. We tested whether muscle coordination would change with muscle size using data derived from human cycling: this paradigm allowed for controlled changes in both crank torque and cadence, allowing the multifactorial problem of muscle power output to be decomposed. We used kinematic and pedal data from 12 cyclists undergoing steady pedalling at cadences from 80 to 140 r.p.m. and generated musculoskeletal simulations of their movements. We introduced novel multisegment muscle models in the simulation that incorporated the internal muscle mass and thus accounted for the scaling effects of muscle tissue inertia. We solved the simulations for the muscle activity that was required to minimise the metabolic cost during cycling for each condition. The masses of the muscle models were scaled across five orders of magnitude. The predicted muscle activations were classified by Principal Component analysis to identify whether the coordination of muscle activity was modulated across models with different sized muscles. Analysis of variance revealed significant changes in coordination at the large-scale factors. This study shows how the coordination of muscle activity during locomotion will likely change across a range of body sizes due to the non-linear effects of the inertial mass within the muscle tissues.

7
Functional distinction between ionic and electric ephaptic effects on neuronal firing dynamics

Hauge, E.; Saetra, M. J.; Einevoll, G.; Halnes, G.

2026-03-30 neuroscience 10.64898/2026.03.26.714388 medRxiv
Top 0.1%
2.2%
Show abstract

Neuronal activity alters extracellular ion concentrations and electric potentials. Ephaptic effects refer to the feedback influence that these extracellular changes can have on neuronal activity. While electric ephaptic effects occur on a fast timescale due to extracellular potential perturbations, ionic ephaptic effects are driven by slower, accumulative changes in ion concentrations. Among the previous computational studies of ephaptic effects, the vast majority have focused exclusively on electric effects, while ionic ephaptic effects have largely been neglected. In this work, we present an electrodiffusive computational framework consisting of two-compartment neurons that interact via a shared extracellular space. By accounting for both electric potentials and ion-concentration dynamics in a self-consistent manner, our framework enables us to explore the relative roles of electric and ionic ephaptic effects. Through numerical experiments, we demonstrate that ionic and electric ephaptic interactions play very different roles. While ionic ephaptic interactions increase population firing rates, electric ephaptic interactions primarily drive subtle shifts in spike timing. Furthermore, we show that these spike shifts cause the phase difference (the distance in spike times between a small collection of neurons) to converge to a stable, unique phase difference, which we coin the ephaptic intrinsic phase preference. Author summaryNeurons predominantly communicate through synapses: specialized contact points where a brief electrical signal, known as a spike or action potential, in one neuron influences another. Neurons generate these spikes by exchanging ions with the surrounding extracellular space. This way, spiking neurons alter extracellular ion concentrations and electric potentials. Since neurons are sensitive to such changes in their environment, they can also influence one another indirectly through the shared extracellular medium. This form of non-synaptic interaction is known as ephaptic coupling. Most computational models of neuronal activity neglect ephaptic interactions, and those that include them typically consider only electric effects while ignoring ionic contributions. As a result, the relative roles of electric and ionic ephaptic effects remain poorly understood. Here, we introduce a computational framework that accounts for both mechanisms in a self-consistent way. Our results show a functional distinction: ionic ephaptic effects act slowly, regulating population firing rates, whereas electric ephaptic effects act on millisecond timescales and subtly shift spike timing. These shifts cause spike-time differences between neurons to converge to a stable value, a phenomenon we call ephaptic intrinsic phase preference.

8
Phase resetting of in-phase synchronized Hodgkin-Huxleydynamics under voltage perturbation reveals reduced null space

Gupta, R.; Karmeshu, ; Singh, R. K. B.

2026-03-24 neuroscience 10.64898/2026.03.21.713085 medRxiv
Top 0.1%
2.0%
Show abstract

Voltage perturbations to a repetitively firing Hodgkin-Huxley (HH) model of neuronal spiking in the bistable regime with coexisting limit cycle and stable steady node can either lead to the spikes phase resetting or collapse to the stable steady state. The latter describes a non-firing hyperpolarized quiescent state of the neuron despite the presence of constant external current. Using asymptotic phase response curve (PRC), the impact of voltage perturbations on a repetitively firing HH model is studied here while it is diffusively coupled to another HH model under identical external stimulation. It is observed that the pre-perturbation state of synchronization and the coupling strength critically determine the PRC response of the perturbed HH dynamics. Higher coupling strengths of perfectly in-phase (anti-phase) synchronized HH models shrink (expand) the combinatorial space of perturbation strengths and the oscillation phases causing collapse to the quiescent state. This indicates reduced (enlarged) basin of attraction, viz. the null space, associated with the steady state in the HH phase space. The findings bear important implications to the spiking dynamics of diverse interneurons, as well as special cases of pyramidal neurons, coupled through electrical synapses via. gap junctions, and suggest the role of gap junction plasticity in tuning vulnerability to quiescent state in the presence of biological noise and spikelets.

9
From Resonance to Computation:A Six-Layer Framework for Analog Neural Processing in Coupled RLC Oscillator Networks

SENDER, J. M.

2026-04-13 neuroscience 10.64898/2026.04.09.717435 medRxiv
Top 0.1%
1.9%
Show abstract

Subthreshold neuronal membranes exhibit resonant, band-pass impedance characterised by an effective inductance arising from voltage-gated channel kinetics--principally Ih. This paper presents a six-layer computational framework that builds from this single-neuron RLC description to a complete account of how coupled neural oscillator networks compute. Layer 1 establishes the RLC neuron as a frequency-selective bandpass filter. Layer 2 shows that coupled RLC neurons encode relational information in phase differences (binding). Layer 3 demonstrates that networks of coupled oscillators form attractor landscapes supporting memory and pattern completion, with fixed-point, limit-cycle, and chaotic attractor classes. Layer 4 identifies the synaptic coupling matrix as a learned impedance network whose topology determines attractor geometry. Layer 5 maps neuromodulatory systems to bias controls that sweep RLC parameters (resonant frequency, quality factor, gain) without modifying stored memories. Layer 6 assembles the full system with cross-frequency multiplexing and homeostatic stabilisation. The framework is grounded in measurable electrical quantities and generates testable predictions distinguishing it from rate-coding and RC integrate-and-fire models. We explicitly address the linearisation gap between the subthreshold regime where the RLC description is rigorous and the nonlinear regime where attractor dynamics operate, the noise and precision limits of analog neural computation ([~] 3.3 effective bits per neuron, compensated by massive parallelism), and the distinction between causal and correlative evidence for oscillation-based coding claims. The framework does not replace existing models; it extends them by showing that rate coding is one (coarse) description of the output of an analog computation whose richer dynamics-- resonance, phase, temporal fine structure--may carry additional computational content.

10
Neuromodulation enables transient flexible control of motoneurons

T. Consul, N.; Avrillon, S.; Bracklein, M.; Gallego, J. A.; Farina, D.

2026-05-05 neuroscience 10.64898/2026.05.01.721852 medRxiv
Top 0.1%
1.8%
Show abstract

A motoneuron pool is often regarded as a rigid controller because the largely shared synaptic input across motoneurons leads to strongly correlated activity. However, brief deviations from this correlated behavior have been observed even in some constrained tasks, raising the question of whether these results reflect limitations of the rigid view of motoneuron pool control. Here we show that they do not. We developed a biophysical model of a motoneuron pool receiving shared excitatory and inhibitory synaptic inputs that also included the motoneuron-specific effects of neuromodulation; model parameters were tuned based on large-scale motoneuron recordings in humans. Simulations showed that the intrinsic differences in how motoneurons respond to neuromodulation are both necessary and sufficient to transiently decorrelate pairs of motoneurons receiving a shared synaptic input. Crucially, such transient decorrelation is only observed when motoneurons have different sensitivity to neuromodulation, consistent with experimental observations during volitional control in humans. Our model also explains how participants can improve their ability to transiently decorrelate the activity of motoneurons innervating the same muscle by leveraging refined behavioral strategies that exploit the differential response of motoneurons to neuromodulation, rather than through physiological changes. These results identify that heterogeneous sensitivity to neuromodulation enables brief flexibility in the otherwise rigid control of motoneurons enforced by a shared synaptic input, and show how practice allows participants to exploit latent flexibility within otherwise rigid constraints.

11
Inter-hemispheric connections modulate splitting in a computational model of the bilateral SCN

Zemlianova, K.; McDaniel, J.; Lander, A. G.; Nwaezeapu, J.; Gutierrez, G. J.

2026-05-05 neuroscience 10.64898/2026.04.30.722022 medRxiv
Top 0.1%
1.5%
Show abstract

The phenomenon of splitting was originally observed in hamsters which, after prolonged exposure to constant light, exhibit two rest/wake cycles within a subjective day. Splitting is a consequence of the left and right suprachiasmatic nuclei (SCN) falling out of synchrony. While it is known that split activity is characterized by an antiphase relationship between the left and right SCN and between the core and shell within each hemisphere, the role of the commissural projections that connect the right and left SCN is not known. In the present study, we investigate the impact of the inter-hemispheric connections on the split and unsplit dynamics of a computational model of the bilateral SCN. Our model has 4 nodes corresponding to each right and left core and shell. We simulated our bilateral model under different lighting conditions and measured its period and the phase relationships among the 4 nodes. To further characterize the dynamics of the system, we performed a bifurcation analysis. We found that the bilateral model automatically splits unless entrained by bright light/dark cycles, or unless it has excitatory inter-hemispheric connections. This suggests that excitatory cross-connections may be important for freerunning behavior. We found that constant light of varying intensities transitions the model between split and unsplit activity only in very limited conditions, but the strength and polarity of the contralateral connections play a much greater role in this dynamical transition. These findings suggest that splitting may involve plasticity of the inter-hemispheric connections of the SCN.

12
A Nonlinear Biomechanical Model for Prognostic Analysis of Clavicle Fractures

Chen, Y.

2026-04-09 bioengineering 10.64898/2026.04.06.716697 medRxiv
Top 0.1%
1.3%
Show abstract

Clavicle fractures often exhibit markedly different clinical outcomes: some patients recover acceptable function despite shortening or displacement, whereas others with apparently similar deformity develop persistent pain, functional loss, or poor healing. To explain this distinction, we propose a minimal nonlinear mechanical model for prognostic analysis of clavicle fractures. The model describes the interaction between fracture-related shortening and compensatory shoulder-girdle posture through a reduced equilibrium equation incorporating stiffness, geometric nonlinearity, and shortening-posture coupling. Within this framework, we analyze equilibrium branches, local stability, and the emergence of critical thresholds. We show that post-fracture destabilization can be interpreted as a fold bifurcation, while more complex parameter dependence gives rise to cusp-type structures and multistability. These bifurcation mechanisms provide a mathematical explanation for sudden deterioration after injury or treatment, as well as for strong inter-individual variability. We further introduce an optimization principle based on a utility functional to guide treatment planning. The analysis predicts that the optimal safe correction should lie strictly below the bifurcation threshold, thereby generating a natural safety margin. Although the model is simplified and has not yet been calibrated against patient data, it nevertheless provides a theoretical framework for understanding why fracture prognosis may deteriorate abruptly near critical mechanical conditions and offers a dynamical-systems interpretation of empirical treatment thresholds used in clinical practice.

13
Electromechanical Dynamics and Myogenic Responses in Cerebral Smooth Muscle Cells and Capillary Pericytes

Khakpour, N.; Sancho, M.; Klug, N. R.; Ferris, H. R.; Dabertrand, F.; Nelson, M. T.; Tsoukias, N. M.

2026-04-06 physiology 10.64898/2026.04.03.715998 medRxiv
Top 0.1%
1.3%
Show abstract

Cerebral blood flow (CBF) control is essential for normal brain function and is disrupted in pathological conditions. Arterial diameters are tightly regulated to provide on demand increases in blood flow in regions of neuronal activity. Pericytes (PCs) exhibit robust myogenic tone and may also respond to neuronal activity to fine-tune local resistance and blood flow. Thus, mural control of microcirculatory resistance may extend beyond arteries and arterioles. Yet, PCs electrophysiology and contractility have not been thoroughly characterized, and this prohibits an integrated view of brain blood flow control. In this study, we develop a detailed mathematical model of mural cell electrophysiology, Ca2+ dynamics and biomechanics. The model is informed by electrophysiological data in smooth muscle cells (SMCs) or PCs and predictions are compared against pressure-induced responses in isolated arterioles and capillaries, respectively. Simulations recapitulate myogenic constrictions and examine differences in contractile dynamics as we move from arterioles to proximal and distal capillaries. In arteriole-to-capillary transitional (ACT) zone PCs, increased mechanosensitivity, more Ca2+ influx through non-selective cation (NSC) channels and/or a higher sensitivity of the contractile apparatus to Ca2+ can compensate for reduced L-type voltage-operated (VOCC) Ca2+ influx and allow for robust constrictions at the lower operating pressures of capillaries relative to the arterioles. A significant Ca2+ influx through NSC relative to VOCC, however, can decouple the PCs contractile apparatus from electrical signaling. Vasoactivity to chemomechanical stimuli along the arteriole to capillary axis is progressively driven by VOCC-independent Ca2+ influx and Ca2+ sensitization with slow kinetics. The proposed cell model can form the basis for detailed multiscale and multicellular models that will examine physiological function at a single vessel or vascular network levels and investigate CBF control in health and in disease. Key pointsO_LIA mural cell model of electrophysiology, calcium (Ca2+) dynamics and biomechanics is informed by data and adapted for modeling cerebral arteriole smooth muscle cells and capillary pericytes. C_LIO_LIIon channel activities are characterized by patch-clamp electrophysiology in isolated cerebral smooth muscle cell and pericytes, and capillary and arteriole electromechanical responses to transmural pressure changes are assessed using novel ex vivo preparations. C_LIO_LIMyogenic constrictions in arterioles can be reproduced by pressure-induced non-selective cation channel (NSC) activation that depolarizes the cell, opens L-type Ca2+ channels (VOCCs) and increases Ca2+ influx. C_LIO_LIRobust myogenic constrictions in arteriole-to-capillary transition (ACT) zone pericytes may reflect significant Ca2+ influx through NSC, increased mechanosensitivity, or higher sensitivity of the contractile apparatus to Ca2+, potentially compensating for reduced VOCC density relative to arteriolar smooth muscle. C_LIO_LIA significant contribution of NSC relative to VOCC in Ca2+ influx, can decouple the contractile apparatus from electrical signaling. C_LIO_LIThe model shows how gradients in ionic activities, mechanosensitivity and/or Ca2+ sensitivity can alter contractile phenotype and electromechanical coupling along the arteriole to capillary continuum. C_LIO_LIThe proposed model can form the basis for detailed multiscale and multicellular models that will investigate cerebral blood flow control in health and in disease. C_LI

14
Mechanical Work Performance Constraints and Timing Govern Human Walking: A Modified Inverted Pendulum Model for Single Support

Hosseini-Yazdi, S.-S.; Bertram, J. E.

2026-03-11 bioengineering 10.64898/2026.03.09.710603 medRxiv
Top 0.1%
1.2%
Show abstract

Human walking is often considered an inverted pendulum during single support, suggesting conservative dynamics. Gait consists of discrete steps connected by mechanically costly transitions. We examine how step length, walking speed, and work capacity jointly constrain walking mechanics. Using a powered simple walking model, minimum speed required to complete a step of given length is derived based on gravitational work; below this threshold, forward progression becomes mechanically infeasible, and the next heel-strike occurs early, producing shorter steps. Comparisons with empirical step length-speed relationships show that humans walk at higher speeds and require greater push-off work, indicating energy dissipation. We extend pendular dynamics by incorporating hip torque, a linearized axial force model, and muscle intervention. This framework reproduces key GRF features, including the M-shaped profile, without prescribing force trajectories a priori. Fitted parameters suggest reduced average loading (CBaseline < 1), active mid-stance unloading (Am < 0), and narrowly timed muscle action (small{sigma} m). Parameter studies show that increasing step length or speed increases transition work and peak forces, while hip torque timing indicates mechanical cost is minimized when energy modulation occurs after mid-stance. These findings indicate that preferred walking speed emerges from feasibility and work-capacity constraints, not energetic optimality alone.

15
The effects of muscle fibre type distribution on gait biomechanics: A predictive simulation study

Daehlin, T. E.; Ross, S. A.; De Groote, F.; Wakeling, J. M.

2026-04-15 bioengineering 10.64898/2026.04.13.718234 medRxiv
Top 0.2%
1.2%
Show abstract

AO_SCPLOWBSTRACTC_SCPLOWMuscle fibre type distribution influences both the metabolic and contractile properties of individual muscles. However, as humans tend to self-optimize their gait pattern to minimize cost of transport, these changes in muscle properties may influence gait biomechanics in manners that are difficult to isolate in in vivo experiments. The purpose of this study was to predict the influence of muscle fibre type distribution on the metabolic cost and biomechanics of simulated walking and running. We implemented a muscle model that could predict recruitment of slow and fast twitch muscle fibres in a framework for predictive musculoskeletal simulation. Subsequently, we employed the framework to investigate how metabolic cost of transport, stride length, stride frequency, and mechanical work performed by slow and fast twich muscle fibres were influenced by fibre type distribution across locomotion speeds from 1.0 to 4.5 m {middle dot} s-1. Our results predict that cost of transport increases as slow twitch area fraction decreases, while stride length and frequency was minimally affected by fibre type distribution at speeds resulting in walking. In contrast, fibre type distribution interacts with locomotion speed at speeds resulting in running. Specifically, we predict the existence of a threshold speed below which cost of transport decreases with an increasing proportion of slow twitch fibres, while cost of transport increases with increasing proportions of slow twitch fibres above it. The shift in fibre type distribution was accompanied by an increase in stride frequency and decrease in stride length. These shifts in spatiotemporal characteristics appear to allow the muscles to operate at speeds close to those that achieve peak mechanical efficiency. Taken together, the results of this study predict that muscle fibre type distribution may influence both the energetics and biomechanics of gait, and that this influence is dependent upon the locomotion speed.

16
Experiment-free learning of exoskeleton assistance remains an unsolved problem

Collins, S. H.; De Groote, F.; Gregg, R. D.; Huang, H.; Lenzi, T.; Sartori, M.; Sawicki, G. S.; Si, J.; Slade, P.; Young, A. J.

2026-04-06 physiology 10.64898/2026.04.01.715109 medRxiv
Top 0.2%
1.0%
Show abstract

In "Experiment-free exoskeleton assistance via learning in simulation", Luo et al. [1] present an ambitious framework for developing exoskeleton controllers through reinforcement learning exclusively in computer simulation. The authors report that a control policy trained on a small dataset from one subject was directly transferred to physical hardware, reducing human metabolic cost during walking, running, and stair climbing by more than any prior device. If confirmed, this would represent a major breakthrough for the field of wearable robotics and their clinical applications. However, a close examination of the published materials casts doubt on these claims. The reported experimental results violate physiological limits on the relationship between mechanical power and muscle energy use during gait2,3,4. The algorithmic claims are surprising and cannot be verified; in contrast with established replicability standards in machine learning5,6, executable code has not been made available. We conclude that the goals of this study have not yet been verifiably achieved and make recommendations for avoiding publication errors of this type in the future.

17
Neuromuscular impairments alter energetic cost landscape curvature and stride speed variability in post-stroke locomotion

Smith, M.; Namburi, P.; Seethapathi, N.; Anthony, B.

2026-04-29 neuroscience 10.64898/2026.04.27.721024 medRxiv
Top 0.2%
0.8%
Show abstract

Neuromuscular impairments induce compensatory effects which alter the dynamics of human movement, but the mechanism linking specific impairments to post-stroke locomotion remains poorly understood. Here, we combine a predictive neuromusculoskeletal simulation framework with experimental gait observations in stroke survivors to test how two hemiparetic impairments, reduced muscle strength and increased baseline muscle activity, reshape the energetic cost landscape. We then evaluate whether impairment-dependent changes in the cost landscape curvature are associated with stride speed variability, which is experimentally observed to be higher after stroke. Using neuromusculoskeletal simulations, we show that increased paretic muscle activity reduces local curvature near the cost-minimized speed more than reduced paretic muscle strength and find that this predicts increases in stride speed variability observed in hemiparetic locomotion. These results support a mechanistic hypothesis that flatter cost landscapes reduce the relative cost of suboptimal behavior and, therefore, may contribute to increased motor variability after stroke. Author summaryMotor disorders, such as those caused by stroke, change the way humans walk and interact with the world, often reducing quality of life. Stroke affects millions of people each year and commonly causes unilateral motor impairment that requires substantial rehabilitation. In this study, we use simulations to understand how different impairments, specifically reduced muscle strength and increased muscle activity, alter movement behavior. By varying the severity of the impairment and the speed of walking, we show how different impairments lead to compensation strategies and influence sensitivity to speed fluctuations. These findings suggest that the energetic penalty incurred from suboptimal behavior changes with neuromuscular impairment and are predicted to contribute to increased variability after stroke.

18
Distributed elasticity: a high-reward, moderate-risk strategy for efficient control modulation in insect flight

Wang, L.; Zhang, C.; Asadimoghaddam, N.; Pons, A.

2026-03-25 systems biology 10.64898/2026.03.23.713675 medRxiv
Top 0.2%
0.8%
Show abstract

The environments inhabited by flying insects demand a balance between flight efficiency and flight manoeuvrability. In structural oscillators such as the insect indirect flight motor, efficiency (arising from resonance) and manoeuvrability (arising from kinematic modulation) are typically quid pro quo, with modulation incurring penalties to efficiency. Band-type resonance is a phenomenon that offers, in theory, a strategy to lessen these penalties via careful navigation through a band of efficient kinematic states. However, identifying this band is challenging: no methods exist to identify the complete band in realistic motor models, involving elasticity distributed across thorax and wing. Nor are the effects of elasticity distribution on the band known. In this work, we address both open topics. We present a suite of numerical methods for identifying the complete resonance band in general systems. Applying them to models of the insect flight motor with distributed elasticity--thoracic and wing flexion--reveals that distributed elasticity is moderate-risk but high-reward morphological feature. Well-tuned distributions expand the resonance band over fourfold whereas poorly-tuned distributions completely extinguish the resonance band. These results indicate that distributing elasticity across the insect flight motor can have adaptive value, and motivate broader work identifying distributions across species.

19
FATE (Fish Aquarium with a Turbulent Environment): a turbulence-control facility for quantifying fish-flow interactions and collective behavior

Calicchia, M. A.; Ni, R.

2026-03-27 bioengineering 10.64898/2026.03.25.714166 medRxiv
Top 0.2%
0.8%
Show abstract

Despite its ubiquity in natural flows, the effects of turbulence on fish locomotion and behavior remain poorly understood. The prevailing hypothesis is that these effects depend on the spatial and temporal scales of the turbulence relative to the fishs size and swimming speed. But in conventional facilities, turbulence usually increases with mean flow, which forces higher swimming speeds and can leave these relative scales unchanged. We therefore present a novel experimental facility that leverages a jet array to decouple the turbulence from the mean flow and systematically control its scales. This approach allows the ratio of turbulent to fish inertial scales to be varied over an order of magnitude, providing a controlled framework for quantifying fish-turbulence interactions. The facility also supports experiments probing strategies fish may use to cope with turbulence, including collective behaviors. Insights from this work have broader implications for ecological studies and engineering applications, including the design of effective fishways and bio-inspired underwater vehicles.

20
Removing head ganglia in amphibious centipedes unveils descending contribution to versatile locomotor repertoire

Yasui, K.; Standen, E. M.; Kano, T.; Aonuma, H.; Ishiguro, A.

2026-04-06 neuroscience 10.64898/2026.04.02.716080 medRxiv
Top 0.2%
0.8%
Show abstract

Understanding how animals produce a versatile locomotor repertoire requires unraveling the interplay between higher centers, decentralized locomotor circuits, and sensory feedback. However, the principles governing their integration remain elusive. We investigated amphibious centipedes through stepwise neural lesions and neuromechanical modeling. Behavioral experiments revealed that while decentralized circuits autonomously generate coordination, the brain and subesophageal ganglion provide situational flexibility, such as modulating trunk undulation and initiating leg folding. Integrating these findings, our model demonstrated how higher centers selectively inhibit or release lower circuit dynamics. Simulations verified that varying only a few descending control parameters reproduces transitions between slow walking, fast walking, and swimming. This work may capture the essence of the locomotor circuitry that harnesses decentralized self-organization to coordinate the bodys large degrees of freedom.